Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| monofunctional biosynthetic peptidoglycan transglycosylase | CUU_3758 | Not Available | - | 1704698 - 1705420 | 27910.3 |
| ompa family protein | CUU_3760 | Not Available | - | 1705549 - 1706280 | 24973.8 |
| mate efflux family protein | CUU_3761 | Not Available | - | 1706317 - 1707660 | 49290.3 |
| glycine hydroxymethyltransferase | CUU_3762 | Not Available | - | 1707859 - 1709139 | 46829.6 |
| conserved hypothetical protein | CUU_3763 | Not Available | - | 1709386 - 1710105 | 27401.5 |
| flavin reductase-like protein | CUU_3764 | Not Available | - | 1710115 - 1710708 | 22159.8 |
| aspartate carbamoyltransferase, regulatory subunit | CUU_3765 | Not Available | - | 1710708 - 1711175 | 17408.3 |
| aspartate carbamoyltransferase | CUU_3766 | Not Available | - | 1711184 - 1712125 | 36259.7 |
| transglycosylase | CUU_3767 | Not Available | + | 1712307 - 1714613 | 87410.0 |
| dihydrodipicolinate synthase | CUU_3502 | Not Available | - | 1715084 - 1715977 | 32789.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
