Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fg-gap repeat protein | CUU_2714 | Not Available | - | 1676113 - 1678020 | 70631.4 |
| polygalacturonase (pectinase) | CUU_2715 | Not Available | - | 1678017 - 1679291 | 48193.9 |
| hypothetical protein | CUU_2717 | Not Available | + | 1679281 - 1679490 | 7646.37 |
| conserved domain protein | CUU_2716 | Not Available | - | 1679469 - 1681820 | 89583.0 |
| putative lipoprotein | CUU_2718 | Not Available | - | 1682092 - 1684209 | 80941.6 |
| putative lipoprotein | CUU_2719 | Not Available | - | 1684265 - 1686508 | 84381.9 |
| putative pectate lyase | CUU_2720 | Not Available | - | 1686514 - 1688016 | 56849.0 |
| ragb, susd and hypothetical protein | CUU_2721 | Not Available | - | 1688115 - 1689992 | 70189.5 |
| tonb-dependent receptor | CUU_2722 | Not Available | - | 1690011 - 1693550 | 130848.0 |
| sigma factor regulatory protein, fecr/pupr family | CUU_2723 | Not Available | - | 1693668 - 1694687 | 39133.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
