Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | CUU_3267 | Not Available | - | 1613597 - 1615045 | 54497.3 |
| tonb-dependent receptor plug domain protein | CUU_3268 | Not Available | - | 1615065 - 1618418 | 125069.0 |
| sigma factor regulatory protein, fecr/pupr family | CUU_3269 | Not Available | - | 1618434 - 1619603 | 44561.6 |
| rna polymerase sigma-70 factor | CUU_3270 | Not Available | - | 1619707 - 1620258 | 21576.8 |
| muts2 family protein | CUU_3271 | Not Available | - | 1620338 - 1622848 | 95377.9 |
| Trna-ser | Not Available | Not Available | + | 1622997 - 1623081 | Not Available |
| site-specific recombinase, phage integrase family | CUU_3273 | Not Available | + | 1623357 - 1624595 | 47375.8 |
| conserved domain protein | CUU_3274 | Not Available | + | 1624671 - 1625213 | 20786.1 |
| dna repair protein | CUU_3275 | Not Available | + | 1625472 - 1625924 | 16937.5 |
| antirestriction protein | CUU_3276 | Not Available | + | 1626278 - 1626868 | 23318.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
