Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative nadh:ubiquinone oxidoreductase, na(+)-translocating, e subunit | CUU_2362 | Not Available | + | 1478295 - 1478897 | 21298.3 |
| conserved domain protein | CUU_2363 | Not Available | + | 1479039 - 1479935 | 33994.2 |
| udp-glucose 4-epimerase | CUU_2364 | Not Available | + | 1479968 - 1481002 | 37984.7 |
| conserved hypothetical protein | CUU_2365 | Not Available | + | 1481356 - 1483173 | 68932.7 |
| putative membrane protein | CUU_2366 | Not Available | + | 1483314 - 1484204 | 32573.4 |
| aspartate ammonia-lyase | CUU_2367 | Not Available | + | 1484468 - 1485901 | 52225.3 |
| putative lipoprotein | CUU_2368 | Not Available | - | 1486122 - 1486532 | 15572.0 |
| conserved hypothetical protein | CUU_2369 | Not Available | - | 1486561 - 1488048 | 56303.9 |
| dipeptidyl peptidase iv n-terminal domain protein | CUU_2370 | Not Available | - | 1488219 - 1490450 | 84423.6 |
| peptidase c1-like protein | CUU_2371 | Not Available | - | 1490581 - 1491771 | 45309.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
