Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system, toxin component, hica family | CUU_2342 | Not Available | + | 1453759 - 1453914 | 5724.07 |
| hypothetical protein | CUU_2343 | Not Available | + | 1453954 - 1454346 | 14724.7 |
| gtp-binding protein lepa | CUU_2344 | Not Available | + | 1454430 - 1456211 | 66375.4 |
| na+/h+ antiporter nhaa | CUU_2345 | Not Available | + | 1456343 - 1457683 | 48656.6 |
| sensor histidine kinase/response regulator | CUU_2346 | Not Available | - | 1457686 - 1459959 | 87472.2 |
| putative glutamate/gamma-aminobutyrate antiporter | CUU_2347 | Not Available | - | 1460176 - 1461753 | 56490.7 |
| ion channel | CUU_2348 | Not Available | + | 1461920 - 1462654 | 28208.9 |
| transglutaminase-like protein | CUU_2349 | Not Available | + | 1462736 - 1465399 | 99180.9 |
| cutc family protein | CUU_2350 | Not Available | - | 1465494 - 1466357 | 31395.5 |
| glutaminase a | CUU_2351 | Not Available | - | 1466658 - 1467620 | 34758.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
