Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trag family protein | CUU_3620 | Not Available | - | 1372431 - 1374440 | 76602.0 |
| relaxase/mobilization nuclease domain protein | CUU_3621 | Not Available | - | 1374473 - 1375726 | 46768.7 |
| conserved hypothetical protein | CUU_3622 | Not Available | - | 1375705 - 1376130 | 16635.2 |
| formyltetrahydrofolate deformylase | CUU_3947 | Not Available | + | 1377142 - 1377999 | 33273.6 |
| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | CUU_3948 | Not Available | + | 1377999 - 1378589 | 22270.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | CUU_3949 | Not Available | + | 1378631 - 1379350 | 26636.3 |
| imidazoleglycerol phosphate synthase, cyclase subunit | CUU_3950 | Not Available | + | 1379360 - 1380115 | 27219.5 |
| phosphoribosyl-atp diphosphatase | CUU_3951 | Not Available | + | 1380280 - 1380891 | 23137.6 |
| abc transporter, atp-binding protein | CUU_3952 | Not Available | + | 1380894 - 1381652 | 28536.4 |
| amino acid kinase family protein | CUU_3954 | Not Available | + | 1381760 - 1383079 | 49296.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
