Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose-proton symport protein | CUU_0935 | Not Available | - | 1290995 - 1292014 | 36119.1 |
| l-rhamnose isomerase | CUU_0936 | Not Available | - | 1292107 - 1293360 | 47405.2 |
| rhamnulokinase | CUU_0937 | Not Available | - | 1293403 - 1294881 | 55020.9 |
| arginine repressor | CUU_0938 | Not Available | + | 1295188 - 1295664 | 17529.3 |
| conserved hypothetical protein | CUU_0939 | Not Available | + | 1295687 - 1296244 | 20661.0 |
| putative argininosuccinate synthase | CUU_0940 | Not Available | + | 1296410 - 1297552 | 42743.8 |
| n-acetyl-gamma-glutamyl-phosphate reductase | CUU_0941 | Not Available | + | 1297558 - 1298526 | 36000.4 |
| aminotransferase, class iii | CUU_0942 | Not Available | + | 1298540 - 1299664 | 40922.8 |
| pyrroline-5-carboxylate reductase | CUU_0943 | Not Available | + | 1299848 - 1300621 | 27247.4 |
| transcriptional regulator, arac family | CUU_0945 | Not Available | + | 1300804 - 1301694 | 34355.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
