Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | CUU_0905 | Not Available | + | 1245572 - 1246267 | 26719.6 |
| putative alpha-1,2-mannosidase | CUU_0906 | Not Available | + | 1246361 - 1248583 | 83587.0 |
| rna polymerase sigma-70 factor | CUU_0907 | Not Available | + | 1248731 - 1249363 | 24972.3 |
| sigma factor regulatory protein, fecr/pupr family | CUU_0908 | Not Available | + | 1249428 - 1250384 | 36537.9 |
| putative alpha-1,2-mannosidase | CUU_0909 | Not Available | + | 1250402 - 1252684 | 86462.6 |
| putative alpha-1,2-mannosidase | CUU_0910 | Not Available | + | 1252714 - 1255026 | 87838.7 |
| hypothetical protein | CUU_0911 | Not Available | + | 1255037 - 1255219 | 7189.87 |
| tonb-dependent receptor plug domain protein | CUU_0912 | Not Available | + | 1255315 - 1258716 | 124918.0 |
| putative lipoprotein | CUU_0913 | Not Available | + | 1258740 - 1260509 | 66811.8 |
| endonuclease/exonuclease/phosphatase family protein | CUU_0914 | Not Available | + | 1260553 - 1261398 | 31930.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
