Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | CUU_0895 | Not Available | - | 1236703 - 1237287 | 22907.3 |
| mate efflux family protein | CUU_0896 | Not Available | - | 1237402 - 1238694 | 48450.7 |
| putative lipoprotein | CUU_0897 | Not Available | - | 1238909 - 1239748 | 32293.0 |
| leucyltransferase | CUU_0898 | Not Available | - | 1239889 - 1240542 | 24969.1 |
| putative atp-dependent clp protease atp-binding subunit clpa | CUU_0899 | Not Available | - | 1240638 - 1242866 | 83016.6 |
| atp-dependent clp protease adaptor protein clps | CUU_0900 | Not Available | - | 1242884 - 1243207 | 12596.2 |
| hypothetical protein | CUU_0901 | Not Available | + | 1243263 - 1243379 | 4459.36 |
| pyridoxamine 5'-phosphate oxidase family protein | CUU_0902 | Not Available | - | 1243421 - 1243828 | 15227.3 |
| transcriptional regulator, arac family | CUU_0903 | Not Available | - | 1243902 - 1244717 | 31074.5 |
| membrane family protein | CUU_0904 | Not Available | - | 1244726 - 1245412 | 25460.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
