Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus PC510
Accession NumberADKO00000000.1
Gene Summary
Adenine Count
1359298 bp
Thymine Count
1396111 bp
Guanine Count
1037487 bp
Cytosine Count
988803 bp
Genome Length
4781702 bp
Protein-coding Genes
3956 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved domain protein | CUU_0885 | Not Available | - | 1229013 - 1229264 | 9432.45 |
| conserved hypothetical protein | CUU_0886 | Not Available | - | 1229334 - 1230221 | 34750.8 |
| conserved hypothetical protein | CUU_0887 | Not Available | - | 1230225 - 1231367 | 44596.5 |
| hypothetical protein | CUU_0888 | Not Available | - | 1231352 - 1231585 | 8810.25 |
| conserved hypothetical protein | CUU_0889 | Not Available | + | 1231667 - 1231870 | 7703.53 |
| site-specific recombinase, phage integrase family | CUU_0890 | Not Available | - | 1231951 - 1233240 | 49031.5 |
| Trna-phe | Not Available | Not Available | + | 1233647 - 1233722 | Not Available |
| Trna-pro | Not Available | Not Available | + | 1233903 - 1233975 | Not Available |
| alpha-galactosidase | CUU_0893 | Not Available | + | 1234257 - 1235864 | 60398.3 |
| transcriptional regulator, luxr family | CUU_0894 | Not Available | + | 1235915 - 1236685 | 29509.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
