Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tmem165/gdt1 family proteinPP1Y_RS09695Not Available-757140 - 75771520617.7
tonb-dependent receptor domain-containing proteinPP1Y_RS09700Not Available-758044 - 76074399156.9
hypothetical proteinPP1Y_RS09705Not Available-760833 - 76243154720.8
hypothetical proteinPP1Y_RS09710Not Available+762721 - 76309513182.8
trbc/virb2 family proteinPP1Y_RS09715Not Available+763343 - 76369911895.8
type iv secretion system protein virb3PP1Y_RS09720Not Available+763711 - 76399210549.0
virb4 family type iv secretion/conjugal transfer atpasePP1Y_RS09725Not Available+764021 - 76645388590.8
type iv secretion system proteinPP1Y_RS09730Not Available+766461 - 76769341361.7
trbg/virb9 family p-type conjugative transfer proteinPP1Y_RS09735Not Available+767690 - 76852929865.6
trbi/virb10 family proteinPP1Y_RS09740Not Available+768533 - 76962136433.9

Displaying genes 971 – 980 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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