Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
alpha/beta fold hydrolasePP1Y_RS08840Not Available-552936 - 55364925506.6
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabPP1Y_RS08845Not Available-553646 - 55498048402.8
trna (cytidine(34)-2'-o)-methyltransferasePP1Y_RS08850Not Available+555171 - 55562316194.5
nad(p)-dependent alcohol dehydrogenasePP1Y_RS08855Not Available-555809 - 55692439243.2
sdr family oxidoreductasePP1Y_RS08860Not Available-556968 - 55770825440.6
2-hydroxyacid dehydrogenasePP1Y_RS08865Not Available-557705 - 55866132949.7
sdr family oxidoreductasePP1Y_RS08870Not Available-558679 - 55944027030.0
l-idonate 5-dehydrogenasePP1Y_RS08875Not Available+559630 - 56067636751.6
hypothetical proteinPP1Y_RS08880Not Available+560673 - 56102312882.4
laci family dna-binding transcriptional regulatorPP1Y_RS08885Not Available+561061 - 56216739479.1

Displaying genes 801 – 810 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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