Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
doxx family proteinPP1Y_RS07290Not Available-244787 - 24519114459.0
hypothetical proteinPP1Y_RS07295Not Available-245436 - 24583714490.4
metalloprotease tlddPP1Y_RS07300Not Available-245948 - 24736650014.4
zinc-finger domain-containing proteinPP1Y_RS07305Not Available-247476 - 2476887579.8
abc transporter atp-binding proteinPP1Y_RS07310Not Available+247852 - 24879634534.7
l-aspartate oxidasePP1Y_RS07315Not Available+248896 - 25049458849.1
glsb/yeaq/ymge family stress response membrane proteinPP1Y_RS07320Not Available-250587 - 2508328229.56
ribonucleoside-diphosphate reductase subunit alphaPP1Y_RS07325Not Available+251436 - 25347875397.3
hypothetical proteinPP1Y_RS07330Not Available-253621 - 25408817379.0
pepsy domain-containing proteinPP1Y_RS07335Not Available+254520 - 25491214511.7

Displaying genes 521 – 530 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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