Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
putative entry exclusion protein trbk-altPP1Y_RS26575Not Available-39758 - 4007211167.5
p-type conjugative transfer protein trbjPP1Y_RS00460Not Available-40017 - 4073925610.0
conjugal transfer protein trbePP1Y_RS00465Not Available-40746 - 4317288600.6
virb3 family type iv secretion system proteinPP1Y_RS00470Not Available-43169 - 434419752.05
trbc/virb2 family proteinPP1Y_RS00475Not Available-43441 - 4377311437.1
p-type conjugative transfer atpase trbbPP1Y_RS00480Not Available-43770 - 4475635063.6
recombinase family proteinPP1Y_RS24955Not Available-45360 - 456179203.08
sterol desaturase family proteinPP1Y_RS00490Not Available-45786 - 4640323480.7
2-dehydro-3-deoxyphosphooctonate aldolasePP1Y_RS24960Not Available-46525 - 4703418422.0
type ii toxin-antitoxin system rele/pare family toxinPP1Y_RS00505Not Available+47020 - 4806236438.2

Displaying genes 41 – 50 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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