Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
urease accessory protein uredPP1Y_RS05670Not Available+1055227 - 105609630651.9
urease subunit gammaPP1Y_RS05675Not Available+1056098 - 105640011011.4
urease subunit betaPP1Y_RS05680Not Available+1056384 - 105672511948.1
urease subunit alphaPP1Y_RS05685Not Available+1056725 - 105843460297.4
urease accessory protein ureePP1Y_RS25275Not Available+1058443 - 105899420270.8
urease accessory protein urefPP1Y_RS05695Not Available+1058936 - 105968226725.9
urease accessory protein uregPP1Y_RS05700Not Available+1059688 - 106032622347.1
hupe/urej family proteinPP1Y_RS05705Not Available+1060323 - 106088918661.1
atp-binding proteinPP1Y_RS05710Not Available+1060944 - 1064063113626.0
dna-binding response regulatorPP1Y_RS05715Not Available+1064060 - 106493831312.7

Displaying genes 4861 – 4870 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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