Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
lysr family transcriptional regulatorPP1Y_RS05570Not Available+1034034 - 103518841969.1
nad(p)-dependent oxidoreductasePP1Y_RS05575Not Available+1035297 - 103616630175.2
amidohydrolase family proteinPP1Y_RS05580Not Available+1036163 - 103718838437.8
aromatic ring-hydroxylating dioxygenase subunit alphaPP1Y_RS05585Not Available+1037193 - 103822738978.7
protocatechuate 4,5-dioxygenase subunit alphaPP1Y_RS05590Not Available+1038224 - 103863415722.4
class iii extradiol dioxygenase subunit betaPP1Y_RS05595Not Available+1038636 - 103954432890.3
gfo/idh/moca family oxidoreductasePP1Y_RS05600Not Available+1039575 - 104053435159.7
aldo/keto reductasePP1Y_RS05605Not Available+1040534 - 104152635928.6
nodulation protein nfedPP1Y_RS05610Not Available+1041804 - 104314146139.8
slipin family proteinPP1Y_RS05615Not Available+1043171 - 104395029003.2

Displaying genes 4841 – 4850 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites