Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
alpha/beta hydrolasePP1Y_RS05520Not Available+1024196 - 102505630731.8
family 1 glycosylhydrolasePP1Y_RS05525Not Available+1025118 - 102638946370.4
helix-turn-helix domain-containing proteinPP1Y_RS05530Not Available-1026386 - 102726732650.2
4-hydroxybenzoate 3-monooxygenasePP1Y_RS05535Not Available+1027394 - 102856342963.2
protocatechuate 4,5-dioxygenase subunit alphaPP1Y_RS05540Not Available+1028791 - 102920114741.5
class iii extradiol dioxygenase family proteinPP1Y_RS05545Not Available+1029206 - 103004530928.7
cytochrome p450PP1Y_RS05550Not Available+1030069 - 103125343620.8
amidohydrolase family proteinPP1Y_RS05555Not Available-1031320 - 103221032883.2
4-oxalomesaconate tautomerasePP1Y_RS05560Not Available-1032203 - 103326736774.1
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylasePP1Y_RS05565Not Available-1033260 - 103393423762.7

Displaying genes 4831 – 4840 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites