Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tonb-dependent receptorPP1Y_RS04350Not Available+748173 - 75040180580.8
gluconate 2-dehydrogenase subunit 3 family proteinPP1Y_RS04355Not Available+750554 - 75119523291.8
gmc oxidoreductasePP1Y_RS04360Not Available+751206 - 75289161761.1
llm class flavin-dependent oxidoreductasePP1Y_RS04365Not Available+753511 - 75462341138.9
tonb-dependent receptorPP1Y_RS04370Not Available+754801 - 75709582939.8
hydroxypyruvate isomerase family proteinPP1Y_RS04375Not Available+757165 - 75793227868.6
sugar phosphate isomerase/epimerase family proteinPP1Y_RS04380Not Available+758181 - 75920338828.7
duf6379 domain-containing proteinPP1Y_RS04385Not Available+759216 - 75960814781.8
glycoside hydrolase family 3 c-terminal domain-containing proteinPP1Y_RS04390Not Available+759696 - 76208084588.7
mfs transporterPP1Y_RS04395Not Available+762135 - 76358652029.9

Displaying genes 4591 – 4600 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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