Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tetr/acrr family transcriptional regulatorPP1Y_RS03445Not Available-554801 - 55545724393.2
class i adenylate-forming enzyme family proteinPP1Y_RS03450Not Available+555746 - 55738359035.0
sdr family nad(p)-dependent oxidoreductasePP1Y_RS03455Not Available+557530 - 55829127125.6
aromatic ring-hydroxylating oxygenase subunit alphaPP1Y_RS03460Not Available+558291 - 55965852932.4
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaPP1Y_RS03465Not Available+559685 - 56065934882.0
alpha-ketoacid dehydrogenase subunit betaPP1Y_RS03470Not Available+560672 - 56168235933.3
dihydrolipoamide acetyltransferase family proteinPP1Y_RS03475Not Available+561694 - 56313650624.5
acyl-coa dehydrogenase family proteinPP1Y_RS03480Not Available+563150 - 56431041685.1
maoc/paaz c-terminal domain-containing proteinPP1Y_RS03485Not Available-564342 - 56484219068.4
acyl-coa thioesterasePP1Y_RS03490Not Available-564839 - 56584037075.0

Displaying genes 4411 – 4420 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites