Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
lysr family transcriptional regulatorPP1Y_RS03095Not Available+474002 - 47491033478.7
mfs transporterPP1Y_RS03100Not Available-474899 - 47616745073.4
glycoside hydrolase family 2 tim barrel-domain containing proteinPP1Y_RS03105Not Available-476194 - 478983101994.0
sugar kinasePP1Y_RS03110Not Available-478940 - 47989634468.1
mannonate dehydratasePP1Y_RS03115Not Available-479912 - 48112045201.1
glucuronate isomerasePP1Y_RS03120Not Available+481447 - 48284752741.2
mannitol dehydrogenase family proteinPP1Y_RS03125Not Available+482928 - 48421447306.1
autotransporter domain-containing proteinPP1Y_RS03130Not Available+484812 - 48603243414.9
parb/repb/spo0j family partition proteinPP1Y_RS26275Not Available+486098 - 48685327458.0
hypothetical proteinPP1Y_RS26280Not Available+486753 - 48719615995.2

Displaying genes 4341 – 4350 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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