Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tonb-dependent receptorPP1Y_RS01995Not Available-218161 - 22055487423.4
putative urea abc transporter substrate-binding proteinPP1Y_RS02000Not Available+221342 - 22242438212.7
abc transporter permeasePP1Y_RS02005Not Available+222464 - 22327929203.3
atp-binding cassette domain-containing proteinPP1Y_RS02010Not Available+223276 - 22407628754.8
copg family ribbon-helix-helix proteinPP1Y_RS02015Not Available+224069 - 22453017284.8
urea amidolyase associated protein uaap1PP1Y_RS02020Not Available+224527 - 22535129766.6
urea amidolyase associated protein uaap2PP1Y_RS02025Not Available+225367 - 22600522885.0
urea carboxylasePP1Y_RS02030Not Available+226002 - 229598129992.0
allophanate hydrolasePP1Y_RS02035Not Available+229601 - 23136461847.6
hypothetical proteinPP1Y_RS02040Not Available+231367 - 23230833395.9

Displaying genes 4121 – 4130 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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