Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tonb-dependent receptorPP1Y_RS00415Not Available+27525 - 3011092590.8
atxe2 family lasso peptide isopeptidasePP1Y_RS00420Not Available+30263 - 3226073494.9
asparagine synthase-related proteinPP1Y_RS00425Not Available-32315 - 3406963695.1
lasso peptide biosynthesis b2 proteinPP1Y_RS00430Not Available-34066 - 3473424472.1
benenodin family lasso peptidePP1Y_RS25615Not Available-34785 - 349224775.52
duf2274 domain-containing proteinPP1Y_RS00435Not Available-35217 - 354448645.57
trbi/virb10 family proteinPP1Y_RS00440Not Available-35441 - 3678147267.0
p-type conjugative transfer protein trbgPP1Y_RS00445Not Available-36778 - 3779437137.6
conjugal transfer protein trbfPP1Y_RS00450Not Available-37791 - 3847425316.1
p-type conjugative transfer protein trblPP1Y_RS00455Not Available-38478 - 3976142557.7

Displaying genes 31 – 40 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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