Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium sp. PP1Y |
| Strain | sp. PP1Y |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Obligate aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium sp. PP1Y
Accession NumberNC_015579.1
Gene Summary
Adenine Count
37629 bp
Thymine Count
37847 bp
Guanine Count
58360 bp
Cytosine Count
58267 bp
Genome Length
192103 bp
Protein-coding Genes
179 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | PP1Y_RS06515 | Not Available | - | 76145 - 76600 | 15457.7 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | PP1Y_RS06520 | Not Available | - | 76632 - 77324 | 25859.5 |
| hypothetical protein | PP1Y_RS26090 | Not Available | - | 77460 - 77621 | 5769.73 |
| Trna-thr | Not Available | Not Available | + | 77750 - 77824 | Not Available |
| tonb-dependent receptor | PP1Y_RS06535 | Not Available | + | 78032 - 80794 | 102274.0 |
| phytase | PP1Y_RS06540 | Not Available | + | 80794 - 81885 | 37859.6 |
| lytic transglycosylase domain-containing protein | PP1Y_RS06545 | Not Available | + | 81996 - 82610 | 21320.7 |
| utp--glucose-1-phosphate uridylyltransferase | PP1Y_RS06550 | Not Available | - | 82681 - 83562 | 31663.3 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | PP1Y_RS06555 | Not Available | + | 83708 - 84991 | 45106.0 |
| hypothetical protein | PP1Y_RS06560 | Not Available | + | 85059 - 85283 | 7927.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.