Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinPP1Y_RS25560Not Available+3741327 - 374173414271.3
Putative tail proteinPP1Y_RS23675Not Available+3741744 - 374393976991.5
Ribonuclease iiiPP1Y_RS23680Not Available+3743963 - 374442116511.3
ompa family proteinPP1Y_RS23685Not Available+3744614 - 374566937409.6
Que-c like queosine biosynthesis proteinPP1Y_RS23690Not Available-3745832 - 374652724956.5
uroporphyrinogen decarboxylasePP1Y_RS06135Not Available+340 - 137137242.7
copd family proteinPP1Y_RS06140Not Available+1418 - 186116598.8
transcription termination factor rhoPP1Y_RS06145Not Available+2081 - 333746727.4
yjbe family putative metal transport proteinPP1Y_RS06150Not Available+3371 - 407524475.4
quinone oxidoreductase family proteinPP1Y_RS06155Not Available-4096 - 506433548.5

Displaying genes 281 – 290 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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