Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y

Accession NumberNC_015579.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
recombinase family proteinPP1Y_RS00115Not Available+24058 - 2462720374.9
wg repeat-containing proteinPP1Y_RS24910Not Available+24651 - 2639662528.0
duf2971 domain-containing proteinPP1Y_RS00130Not Available-26670 - 2764136647.3
type iv secretory system conjugative dna transfer family proteinPP1Y_RS00135Not Available-27905 - 2978568933.8
p-type dna transfer atpase virb11PP1Y_RS00140Not Available-29804 - 3082037275.6
type iv secretion system protein virb10PP1Y_RS00145Not Available-30824 - 3209543633.1
trbg/virb9 family p-type conjugative transfer proteinPP1Y_RS00150Not Available-32097 - 3310436535.4
virb8 family proteinPP1Y_RS00155Not Available-33106 - 3378324788.6
hypothetical proteinPP1Y_RS00160Not Available-33795 - 3413311400.6
type iv secretion system proteinPP1Y_RS00165Not Available-34193 - 3522135410.5

Displaying genes 201 – 210 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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