Alistipes finegoldii DSM 17242

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes finegoldii DSM 17242 is classified as a mesophile, a chemoheterotrophic organism that produces energy through fermentation, is Gram-negative, rod-shaped, predominantly resides in the human gut, and is an obligate anaerobe. This bacterium thrives at moderate temperatures, ideally between 20°C and 45°C, which aligns with the human body temperature, making it well-suited for its ecological niche. As a chemoheterotroph, A. finegoldii relies on organic compounds from its environment for energy, engaging in fermentation processes to generate adenosine triphosphate (ATP). The Gram-negative nature of A. finegoldii is indicative of its cell wall structure, which contains a thin peptidoglycan layer surrounded by an outer membrane rich in lipopolysaccharides. This feature not only influences its pathogenic potential but also its interaction with the host immune system. The rod shape of the microbe aids in its motility within the dense microbial community of the gut, enabling effective colonization and nutrient acquisition. Predominantly found in the human gastrointestinal tract, A. finegoldii plays a pivotal role in maintaining gut health and homeostasis. Its obligate anaerobic lifestyle means it thrives in environments devoid of oxygen, which is characteristic of the human intestine, where it interacts with other gut microbiota to contribute to digestion and metabolic processes. Recent studies have indicated that A. finegoldii may be involved in the metabolism of certain dietary components, potentially influencing host metabolism and immune responses. Furthermore, its presence or absence has been linked to various health conditions, suggesting a role in maintaining the balance of the gut microbiome. Ongoing research into A. finegoldii may reveal more about its contributions to human health and disease, underscoring its importance in the field of microbiology and gut health research.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes finegoldii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes finegoldii DSM 17242

Accession NumberNC_018011.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3155 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+805012 - 805026Not Available
IntegraseALFI_RS03650Not Available-818759 - 81998247298.1
hypothetical proteinALFI_RS03655Not Available-820862 - 82130216574.4
hypothetical proteinALFI_RS16855Not Available-821950 - 82352160258.3
hypothetical proteinALFI_RS03680Not Available+823941 - 82456423609.8
hypothetical proteinALFI_RS03685Not Available+824933 - 8251367473.97
hypothetical proteinALFI_RS03690Not Available+825129 - 82542511358.8
duf4906 domain-containing proteinALFI_RS03695Not Available-825530 - 82746772514.9
orf6n domain-containing proteinALFI_RS03700Not Available-827516 - 82810322276.9
duf4238 domain-containing proteinALFI_RS03705Not Available-828117 - 82877324846.9

Displaying genes 1 – 10 of 3241 in total

Pathways

43 pathways

Metabolites

326 records
Metabolite IDMetabolite nameStructureCAS number
BASm0034638Adenosine-GDP-cobinamideC68H97CoN21O21P2Chemical structure of Adenosine-GDP-cobinamideNULL
Average1665.5066Da
Monoisotopic1664.597512489Da
BASm0034640Pentaglutamyl Folate (Thf)C39H45N11O18Chemical structure of Pentaglutamyl Folate (Thf)NULL
Average955.851Da
Monoisotopic955.297695132Da
BASm003465710-Formyltetrahydrofolate-[Glu](5)C40H45N11O19Not availableNULL
Average983.861Da
Monoisotopic983.292609752Da
BASm0034668N6-Acetyl-LL-2,6-diaminoheptanedioateC9H14N2O5Chemical structure of N6-Acetyl-LL-2,6-diaminoheptanedioateNULL
Average230.221Da
Monoisotopic230.091368719Da
BASm0034676Reduced FMNC17H23N4O9PChemical structure of Reduced FMNNULL
Average458.3597Da
Monoisotopic458.120264866Da
BASm0034680Glycyl-L-tyrosineC11H14N2O4Chemical structure of Glycyl-L-tyrosineNULL
Average238.243Da
Monoisotopic238.095356939Da

Displaying 321–326 of 326 metabolites