Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes finegoldii DSM 17242
Accession NumberNC_018011.1
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pepsy-like domain-containing protein | ALFI_RS02945 | Not Available | - | 672900 - 673742 | 31496.6 |
| pepsy-like domain-containing protein | ALFI_RS02950 | Not Available | - | 673768 - 674211 | 16560.9 |
| sensor histidine kinase | ALFI_RS02955 | Not Available | - | 674322 - 675602 | 48292.2 |
| response regulator transcription factor | ALFI_RS02960 | Not Available | - | 675599 - 676276 | 25957.1 |
| beta-ketoacyl-acp synthase iii | ALFI_RS02965 | Not Available | - | 676486 - 677514 | 36947.0 |
| phosphate acyltransferase plsx | ALFI_RS02970 | Not Available | - | 677540 - 678487 | 32783.8 |
| 50s ribosomal protein l32 | ALFI_RS16385 | Not Available | - | 678639 - 678824 | 6859.36 |
| yced family protein | ALFI_RS02975 | Not Available | - | 678882 - 679466 | 22172.2 |
| hypothetical protein | ALFI_RS02980 | Not Available | + | 679641 - 680051 | 15015.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | ALFI_RS02985 | Not Available | - | 680118 - 681134 | 36354.5 |
Pathways
43 pathways
Lipoic Acid Metabolism
Lipoic Acid Metabolism
Aspartate Metabolism
Aspartate Metabolism
Glycine Biosynthesis
Glycine Biosynthesis
Histidine Biosynthesis
Histidine Biosynthesis
Methionine Biosynthesis
Methionine Biosynthesis
Glycolate and Glyoxylate Degradation
Glycolate and Glyoxylate Degradation
Lipopolysaccharide Biosynthesis
Lipopolysaccharide Biosynthesis
Oxidative Phosphorylation
Oxidative Phosphorylation