Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes finegoldii DSM 17242
Accession NumberNC_018011.1
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | ALFI_RS12175 | Not Available | - | 2824525 - 2825259 | 27297.5 |
| deoxycytidylate deaminase | ALFI_RS12180 | Not Available | - | 2825480 - 2825917 | 16355.7 |
| preprotein translocase subunit seca | ALFI_RS12185 | Not Available | - | 2825925 - 2829218 | 124846.0 |
| glycosyltransferase | ALFI_RS12190 | Not Available | - | 2829360 - 2830322 | 36571.3 |
| glycosyltransferase family 2 protein | ALFI_RS16665 | Not Available | - | 2830319 - 2831293 | 37974.9 |
| duf2851 family protein | ALFI_RS12200 | Not Available | - | 2831304 - 2832263 | 36266.4 |
| metal-sulfur cluster assembly factor | ALFI_RS12205 | Not Available | - | 2832265 - 2832585 | 12001.8 |
| sufe family protein | ALFI_RS12210 | Not Available | - | 2832713 - 2833141 | 16037.2 |
| alkaline phosphatase family protein | ALFI_RS12215 | Not Available | - | 2833162 - 2834727 | 57686.2 |
| gscfa domain-containing protein | ALFI_RS12220 | Not Available | - | 2834753 - 2835718 | 35812.6 |
Pathways
43 pathways
Lipoic Acid Metabolism
Lipoic Acid Metabolism
Aspartate Metabolism
Aspartate Metabolism
Glycine Biosynthesis
Glycine Biosynthesis
Histidine Biosynthesis
Histidine Biosynthesis
Methionine Biosynthesis
Methionine Biosynthesis
Glycolate and Glyoxylate Degradation
Glycolate and Glyoxylate Degradation
Lipopolysaccharide Biosynthesis
Lipopolysaccharide Biosynthesis
Oxidative Phosphorylation
Oxidative Phosphorylation