Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes finegoldii DSM 17242
Accession NumberNC_018011.1
Gene Summary
Adenine Count
808396 bp
Thymine Count
810556 bp
Guanine Count
1057216 bp
Cytosine Count
1058071 bp
Genome Length
3734239 bp
Protein-coding Genes
3155 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | ALFI_RS07610 | Not Available | + | 1730291 - 1730887 | 23423.4 |
| hypothetical protein | ALFI_RS17410 | Not Available | + | 1730975 - 1731385 | 14802.0 |
| multidrug dmt transporter permease | ALFI_RS17600 | Not Available | + | 1731398 - 1731598 | 7688.98 |
| duf4974 domain-containing protein | ALFI_RS17605 | Not Available | + | 1731692 - 1731976 | 11252.3 |
| susc/raga family tonb-linked outer membrane protein | ALFI_RS07620 | Not Available | + | 1732103 - 1735468 | 123514.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALFI_RS07625 | Not Available | + | 1735482 - 1737092 | 59785.1 |
| glycoside hydrolase family 18 | ALFI_RS07630 | Not Available | + | 1737120 - 1739030 | 70196.1 |
| duf1735 and lamg domain-containing protein | ALFI_RS07635 | Not Available | + | 1739061 - 1740218 | 41978.6 |
| family 20 glycosylhydrolase | ALFI_RS07640 | Not Available | + | 1740460 - 1742520 | 76966.1 |
| pl29 family lyase n-terminal domain-containing protein | ALFI_RS07645 | Not Available | - | 1742612 - 1746238 | 130454.0 |
Pathways
43 pathways
Lipoic Acid Metabolism
Lipoic Acid Metabolism
Aspartate Metabolism
Aspartate Metabolism
Glycine Biosynthesis
Glycine Biosynthesis
Histidine Biosynthesis
Histidine Biosynthesis
Methionine Biosynthesis
Methionine Biosynthesis
Glycolate and Glyoxylate Degradation
Glycolate and Glyoxylate Degradation
Lipopolysaccharide Biosynthesis
Lipopolysaccharide Biosynthesis
Oxidative Phosphorylation
Oxidative Phosphorylation