Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | RCA23_RS00055 | Not Available | - | 12221 - 13477 | 44929.4 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | RCA23_RS00060 | Not Available | - | 13467 - 13889 | 15878.4 |
| queuosine precursor transporter | RCA23_RS00065 | Not Available | - | 14128 - 14772 | 23068.6 |
| penicillin-insensitive murein endopeptidase | RCA23_RS00070 | Not Available | - | 14879 - 15682 | 29364.2 |
| mfs transporter | RCA23_RS00075 | Not Available | - | 15796 - 17181 | 50125.7 |
| thioesterase family protein | RCA23_RS00080 | Not Available | - | 17241 - 17780 | 20704.3 |
| yggt family protein | RCA23_RS00085 | Not Available | + | 17923 - 18201 | 10553.5 |
| dna helicase recq | RCA23_RS00090 | Not Available | + | 18217 - 20277 | 74844.0 |
| peroxide stress protein yaaa | RCA23_RS00095 | Not Available | + | 20300 - 21073 | 28363.7 |
| isopentenyl-diphosphate delta-isomerase | RCA23_RS00100 | Not Available | - | 21070 - 21585 | 19512.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
