Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | RCA23_RS00005 | Not Available | + | 101 - 1447 | 51211.6 |
| dna polymerase iii subunit beta | RCA23_RS00010 | Not Available | + | 1550 - 2668 | 40386.0 |
| dna replication/repair protein recf | RCA23_RS00015 | Not Available | + | 2694 - 3800 | 40758.7 |
| lyse family translocator | RCA23_RS00020 | Not Available | + | 3797 - 4417 | 21794.7 |
| dna topoisomerase (atp-hydrolyzing) subunit b | RCA23_RS00025 | Not Available | + | 4567 - 6984 | 89490.9 |
| fad-dependent oxidoreductase | RCA23_RS00030 | Not Available | + | 7014 - 8384 | 49463.4 |
| rhodanese-related sulfurtransferase | RCA23_RS00035 | Not Available | - | 8392 - 9270 | 32918.1 |
| bifunctional nicotinamidase/pyrazinamidase | RCA23_RS00040 | Not Available | + | 9413 - 10003 | 21052.8 |
| nicotinate phosphoribosyltransferase | RCA23_RS00045 | Not Available | + | 10003 - 11295 | 49553.3 |
| phosphotransferase enzyme family protein | RCA23_RS00050 | Not Available | - | 11292 - 12224 | 34119.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
