Lachnospiraceae bacterium 5_1_63FAA

Anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Description

The Lachnospiraceae bacterium 5_1_63FAA is a Gram-positive, rod-shaped microbe that thrives in mesophilic temperatures, categorized as a Chemoheterotroph, and can inhabit all body sites in various species, including the human gut, skin, and respiratory tract, and is an Obligate Anaerobe. As a Gram-positive bacterium, it has a thick peptidoglycan layer in its cell wall, providing it with a rigid structure and contributing to its resistance to environmental stressors. Its rod shape allows for efficient movement and colonization in its host environment. The mesophilic temperature preference indicates that this bacterium grows best in moderate temperatures, typically between 20-45°C, which is consistent with the temperatures found in many animal hosts. As a Chemoheterotroph, the Lachnospiraceae bacterium 5_1_63FAA relies on organic compounds for energy and carbon, breaking down complex molecules into simpler ones to sustain its metabolic processes. Its ability to inhabit all body sites in various species suggests a high degree of adaptability and versatility. The absence of oxygen is crucial for its survival, as it is an Obligate Anaerobe, meaning it cannot tolerate oxygen and requires a strictly anaerobic environment to grow and thrive. This bacterium plays a significant role in the breakdown of complex polysaccharides and production of short-chain fatty acids, which can have a profound impact on the health and well-being of its host. The Lachnospiraceae bacterium 5_1_63FAA has been implicated in the regulation of the immune system and the maintenance of a healthy gut microbiome, with its metabolic byproducts influencing the expression of genes involved in inflammation and immune response.

Profile

Physiology
Gram staining propertiesUncharacterized
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lachnospiraceae bacterium 5_1_63FAA


Gene Summary

Adenine Count

843334 bp

Thymine Count

1058846 bp

Guanine Count

476888 bp

Cytosine Count

650487 bp

Genome Length

3029557 bp

Protein-coding Genes

2987 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1512004 - 1512015Not Available
Tail proteinHMPREF0996_01505Not Available-1512473 - 151324328558.8
Baseplate j/gp47 family proteinHMPREF0996_01506Not Available-1513227 - 151438142102.7
Gpw/gp25 family proteinHMPREF0996_01507Not Available-1514378 - 151466810619.7
Tail proteinHMPREF0996_01508Not Available-1514690 - 15148726465.73
Tail proteinHMPREF0996_01509Not Available-1514881 - 151538118272.3
Baseplate proteinHMPREF0996_01510Not Available-1515381 - 151579115200.0
Tail proteinHMPREF0996_01511Not Available-1515806 - 151683738787.9
Tail protein xHMPREF0996_01512Not Available-1516824 - 151714712600.6
Tail tape measure proteinHMPREF0996_01513Not Available-1517164 - 1521120130990.0

Displaying genes 11 – 20 of 3105 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0014031Butyric acidC4H8O2Chemical structure of Butyric acid107-92-6
Average88.1051Da
Monoisotopic88.0524295Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014035Glycolic acidC2H4O3Chemical structure of Glycolic acid79-14-1
Average76.0514Da
Monoisotopic76.016043994Da
BASm0014036Glyoxylic acidC2H2O3Chemical structure of Glyoxylic acid298-12-4
Average74.0355Da
Monoisotopic74.00039393Da
BASm0014037Fumaric acidC4H4O4Chemical structure of Fumaric acid110-17-8
Average116.0722Da
Monoisotopic116.010958616Da

Displaying 1–8 of 8 metabolites