Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | EUR_RS00540 | Not Available | + | 107103 - 108395 | 46378.4 |
| hd-gyp domain-containing protein | EUR_RS00545 | Not Available | - | 108554 - 109684 | 42244.6 |
| methionine adenosyltransferase | EUR_RS00550 | Not Available | + | 110134 - 111315 | 43002.2 |
| response regulator transcription factor | EUR_RS00555 | Not Available | + | 111502 - 112191 | 26096.5 |
| sensor histidine kinase | EUR_RS00560 | Not Available | + | 112315 - 113814 | 56329.7 |
| mate family efflux transporter | EUR_RS00565 | Not Available | + | 114058 - 115443 | 50240.6 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | EUR_RS00570 | Not Available | + | 115541 - 116590 | 39487.2 |
| formate c-acetyltransferase | EUR_RS00575 | Not Available | + | 116911 - 119163 | 84649.5 |
| pyruvate formate-lyase-activating protein | EUR_RS00580 | Not Available | + | 119421 - 120170 | 28488.5 |
| rlua family pseudouridine synthase | EUR_RS00585 | Not Available | + | 120351 - 121076 | 27032.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.