Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybab/ebfc family nucleoid-associated protein | EUR_RS03985 | Not Available | + | 820641 - 821366 | 28772.5 |
| hypothetical protein | EUR_RS03990 | Not Available | + | 821488 - 821724 | 8641.99 |
| phosphate abc transporter substrate-binding protein | EUR_RS03995 | Not Available | + | 821814 - 822695 | 30709.9 |
| phosphate abc transporter permease subunit pstc | EUR_RS04000 | Not Available | + | 822820 - 823722 | 31789.5 |
| phosphate abc transporter permease psta | EUR_RS04005 | Not Available | + | 823715 - 824578 | 30645.5 |
| response regulator transcription factor | EUR_RS04010 | Not Available | + | 824888 - 825577 | 25615.1 |
| sensor histidine kinase | EUR_RS04015 | Not Available | + | 825634 - 828057 | 91596.6 |
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | EUR_RS04020 | Not Available | - | 828301 - 828891 | 21716.2 |
| pyridoxal 5'-phosphate synthase lyase subunit pdxs | EUR_RS04025 | Not Available | - | 828893 - 829777 | 31717.6 |
| plp-dependent aminotransferase family protein | EUR_RS04030 | Not Available | + | 830212 - 831609 | 53244.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.