Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadp-specific glutamate dehydrogenase | EUR_RS03035 | Not Available | + | 625765 - 627123 | 48946.3 |
| zf-hc2 domain-containing protein | EUR_RS03040 | Not Available | - | 627222 - 628229 | 36942.0 |
| sigma-70 family rna polymerase sigma factor | EUR_RS03045 | Not Available | - | 628222 - 628710 | 19268.0 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EUR_RS03050 | Not Available | + | 629264 - 630424 | 42832.6 |
| riboflavin synthase | EUR_RS03055 | Not Available | + | 630541 - 631260 | 25698.1 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | EUR_RS03060 | Not Available | + | 631367 - 632563 | 45053.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | EUR_RS03065 | Not Available | + | 632686 - 633150 | 16471.1 |
| cpsb/capc family capsule biosynthesis tyrosine phosphatase | EUR_RS03070 | Not Available | + | 633838 - 634539 | 26543.2 |
| yvek family protein | EUR_RS03075 | Not Available | + | 634564 - 635337 | 28169.6 |
| cpsd/capb family tyrosine-protein kinase | EUR_RS03080 | Not Available | + | 635364 - 636077 | 25899.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.