Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase family protein | EUR_RS02385 | Not Available | + | 496645 - 497940 | 48769.2 |
| carboxynorspermidine decarboxylase | EUR_RS02390 | Not Available | + | 497954 - 499105 | 43394.1 |
| agmatine deiminase | EUR_RS02395 | Not Available | + | 499077 - 500207 | 42036.4 |
| n-carbamoylputrescine amidase | EUR_RS02400 | Not Available | + | 500292 - 501164 | 32709.7 |
| hydroxylamine reductase | EUR_RS02405 | Not Available | - | 501334 - 502920 | 57929.5 |
| mate family efflux transporter | EUR_RS02410 | Not Available | - | 503028 - 504326 | 46562.2 |
| hypothetical protein | EUR_RS02415 | Not Available | + | 504491 - 504898 | 13972.0 |
| hypothetical protein | EUR_RS02420 | Not Available | + | 507207 - 507686 | 16849.7 |
| hypothetical protein | EUR_RS02425 | Not Available | + | 507702 - 508016 | 12163.5 |
| hypothetical protein | EUR_RS02430 | Not Available | + | 508255 - 508728 | 18477.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.