Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly scaffold protein nifu | EUR_RS15725 | Not Available | + | 3279167 - 3279613 | 16144.1 |
| trna 2-thiouridine(34) synthase mnma | EUR_RS15730 | Not Available | + | 3279613 - 3280701 | 40479.2 |
| helix-turn-helix domain-containing protein | EUR_RS15735 | Not Available | - | 3280867 - 3281439 | 21096.5 |
| helix-turn-helix domain-containing protein | EUR_RS16260 | Not Available | - | 3281661 - 3281897 | 8482.43 |
| duf86 domain-containing protein | EUR_RS15745 | Not Available | - | 3281878 - 3282159 | 11119.4 |
| nucleotidyltransferase domain-containing protein | EUR_RS15750 | Not Available | - | 3282152 - 3282625 | 18021.6 |
| aaa family atpase | EUR_RS15755 | Not Available | + | 3282962 - 3284380 | 54364.6 |
| cysteine synthase a | EUR_RS15760 | Not Available | + | 3284533 - 3285465 | 32966.3 |
| tigr04100 family radical sam protein | EUR_RS15765 | Not Available | - | 3285567 - 3286166 | 22614.6 |
| pyridoxamine kinase | EUR_RS15770 | Not Available | - | 3286301 - 3287149 | 31106.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.