Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | EUR_RS13680 | Not Available | + | 2898940 - 2900349 | 52956.3 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | EUR_RS13685 | Not Available | + | 2900546 - 2901610 | 40053.5 |
| stp1/irep family pp2c-type ser/thr phosphatase | EUR_RS13690 | Not Available | + | 2901611 - 2902339 | 26457.4 |
| stk1 family pasta domain-containing ser/thr kinase | EUR_RS13695 | Not Available | + | 2902356 - 2904506 | 77069.8 |
| ribosome small subunit-dependent gtpase a | EUR_RS13700 | Not Available | + | 2905005 - 2905913 | 34287.1 |
| ribulose-phosphate 3-epimerase | EUR_RS13705 | Not Available | + | 2905942 - 2906592 | 23241.4 |
| thiamine diphosphokinase | EUR_RS13710 | Not Available | + | 2906669 - 2907313 | 23650.1 |
| ggdef domain-containing protein | EUR_RS13715 | Not Available | + | 2907423 - 2910743 | 128273.0 |
| enhanced intracellular survival protein eis | EUR_RS13720 | Not Available | + | 2910730 - 2911956 | 47676.6 |
| degv family protein | EUR_RS13725 | Not Available | + | 2911956 - 2912876 | 34504.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.