Agathobacter rectalis DSM 17629

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis DSM 17629 is a Gram-positive, rod-shaped bacterium that functions as a chemoheterotroph, obtaining its energy from organic compounds. This species is nonsporulating and thrives optimally at a temperature of 37.0°C, which is indicative of its potential association with warm-blooded hosts or environments that maintain similar temperatures. A. rectalis is classified as an anaerobe, meaning it requires an oxygen-free environment for growth, thereby suggesting its adaptation to specific niches where oxygen levels are low or absent. The habitat of A. rectalis is diverse, indicating its ability to colonize and survive in various anaerobic environments. This flexibility may allow it to play a role in the complex microbial communities found in the gastrointestinal tracts of hosts. The presence of A. rectalis in such habitats could contribute to the degradation of organic matter and the fermentation processes that are essential for nutrient cycling and maintaining gut health. Given its anaerobic nature and chemoheterotrophic lifestyle, A. rectalis may be involved in the fermentation of dietary fibers, contributing to the production of short-chain fatty acids, which are important for gut health and host metabolism. This highlights A. rectalis as a potentially significant player in the gut microbiome, underscoring the importance of anaerobic bacteria in maintaining the ecological balance within various habitats.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis DSM 17629
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis DSM 17629

Accession NumberNC_021010.1

Gene Summary

Adenine Count

993254 bp

Thymine Count

916171 bp

Guanine Count

725212 bp

Cytosine Count

624393 bp

Genome Length

3344951 bp

Protein-coding Genes

3075 genes

Non-Coding Genes

143 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbEUR_RS13680Not Available+2898940 - 290034952956.3
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnEUR_RS13685Not Available+2900546 - 290161040053.5
stp1/irep family pp2c-type ser/thr phosphataseEUR_RS13690Not Available+2901611 - 290233926457.4
stk1 family pasta domain-containing ser/thr kinaseEUR_RS13695Not Available+2902356 - 290450677069.8
ribosome small subunit-dependent gtpase aEUR_RS13700Not Available+2905005 - 290591334287.1
ribulose-phosphate 3-epimeraseEUR_RS13705Not Available+2905942 - 290659223241.4
thiamine diphosphokinaseEUR_RS13710Not Available+2906669 - 290731323650.1
ggdef domain-containing proteinEUR_RS13715Not Available+2907423 - 2910743128273.0
enhanced intracellular survival protein eisEUR_RS13720Not Available+2910730 - 291195647676.6
degv family proteinEUR_RS13725Not Available+2911956 - 291287634504.3

Displaying genes 2851 – 2860 of 3218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites