Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s8 family peptidase | EUR_RS13430 | Not Available | - | 2844081 - 2845883 | 64792.5 |
| efflux rnd transporter periplasmic adaptor subunit | EUR_RS13435 | Not Available | + | 2846003 - 2847352 | 49090.7 |
| abc transporter atp-binding protein | EUR_RS13440 | Not Available | + | 2847353 - 2848057 | 25977.4 |
| biotin/lipoyl-binding protein | EUR_RS13445 | Not Available | + | 2848035 - 2849600 | 56439.3 |
| abc transporter permease | EUR_RS13450 | Not Available | + | 2849621 - 2850880 | 44848.1 |
| 4fe-4s dicluster domain-containing protein | EUR_RS13455 | Not Available | + | 2851121 - 2852578 | 53016.7 |
| polysaccharide deacetylase family protein | EUR_RS13460 | Not Available | + | 2852931 - 2854400 | 53416.5 |
| cold-shock protein | EUR_RS13465 | Not Available | - | 2854574 - 2854777 | 7285.57 |
| duf5721 family protein | EUR_RS13470 | Not Available | - | 2854863 - 2855366 | 19153.0 |
| m18 family aminopeptidase | EUR_RS13475 | Not Available | + | 2855582 - 2856868 | 47740.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.