Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3990 domain-containing protein | EUR_RS12980 | Not Available | + | 2741859 - 2742320 | 18183.4 |
| hypothetical protein | EUR_RS12985 | Not Available | + | 2742310 - 2742750 | 17657.8 |
| type i-c crispr-associated protein cas5c | EUR_RS12990 | Not Available | + | 2742751 - 2743419 | 25833.3 |
| type i-c crispr-associated protein cas8c/csd1 | EUR_RS12995 | Not Available | + | 2743416 - 2745152 | 65895.7 |
| type i-c crispr-associated protein cas7/csd2 | EUR_RS13000 | Not Available | + | 2745153 - 2746064 | 34491.1 |
| crispr-associated protein cas4 | EUR_RS13005 | Not Available | + | 2746064 - 2746726 | 25643.0 |
| type i-c crispr-associated endonuclease cas1c | EUR_RS13010 | Not Available | + | 2746723 - 2747754 | 39291.8 |
| crispr-associated endonuclease cas2 | EUR_RS13015 | Not Available | + | 2747764 - 2748054 | 10996.4 |
| aaa family atpase | EUR_RS13020 | Not Available | + | 2749557 - 2751149 | 61337.4 |
| orotidine-5'-phosphate decarboxylase | EUR_RS13025 | Not Available | + | 2751319 - 2752251 | 33728.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.