Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ll-diaminopimelate aminotransferase | EUR_RS12780 | Not Available | + | 2688177 - 2689391 | 44296.2 |
| translational gtpase typa | EUR_RS12785 | Not Available | - | 2690721 - 2692553 | 67870.4 |
| single-stranded dna-binding protein | EUR_RS12790 | Not Available | + | 2692764 - 2693384 | 23783.2 |
| atp--corrinoid adenosyltransferase | EUR_RS12795 | Not Available | + | 2693568 - 2694047 | 17652.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EUR_RS12800 | Not Available | + | 2694443 - 2695333 | 31820.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | EUR_RS12805 | Not Available | + | 2695358 - 2696119 | 27370.7 |
| hydroxyethylthiazole kinase | EUR_RS12810 | Not Available | + | 2698225 - 2699172 | 33831.6 |
| thiamine phosphate synthase | EUR_RS12815 | Not Available | + | 2699256 - 2699906 | 23028.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | EUR_RS12820 | Not Available | + | 2700009 - 2700800 | 27613.2 |
| phosphomethylpyrimidine synthase thic | EUR_RS12825 | Not Available | + | 2700845 - 2702155 | 47604.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.