Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lcp family protein | EUR_RS12480 | Not Available | + | 2617736 - 2618953 | 44932.1 |
| utp--glucose-1-phosphate uridylyltransferase | EUR_RS12485 | Not Available | + | 2618989 - 2620197 | 45206.2 |
| s1c family serine protease | EUR_RS12490 | Not Available | + | 2620439 - 2622049 | 56030.9 |
| carbamate kinase | EUR_RS12495 | Not Available | + | 2622631 - 2623563 | 33400.1 |
| oligoendopeptidase f | EUR_RS12500 | Not Available | + | 2623753 - 2625558 | 69483.9 |
| s-ribosylhomocysteine lyase | EUR_RS12505 | Not Available | + | 2625573 - 2626031 | 17368.7 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | EUR_RS12510 | Not Available | + | 2626080 - 2626775 | 24856.0 |
| polysaccharide deacetylase family protein | EUR_RS12515 | Not Available | + | 2626824 - 2627675 | 32321.8 |
| hypothetical protein | EUR_RS12520 | Not Available | + | 2627813 - 2627959 | 5089.17 |
| efflux rnd transporter permease subunit | EUR_RS12525 | Not Available | + | 2628211 - 2631978 | 135449.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.