Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hica family toxin | EUR_RS10480 | Not Available | + | 2195588 - 2195845 | 9760.82 |
| type ii toxin-antitoxin system hicb family antitoxin | EUR_RS10485 | Not Available | + | 2195829 - 2196194 | 13716.2 |
| yitt family protein | EUR_RS10490 | Not Available | - | 2196247 - 2197092 | 31077.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | EUR_RS10495 | Not Available | + | 2197394 - 2198419 | 36350.1 |
| phosphoribosylglycinamide formyltransferase | EUR_RS10500 | Not Available | + | 2198471 - 2199097 | 22683.6 |
| phosphoribosylamine--glycine ligase | EUR_RS10505 | Not Available | + | 2199193 - 2200467 | 46059.1 |
| had family hydrolase | EUR_RS10510 | Not Available | + | 2200457 - 2201104 | 24539.7 |
| eal domain-containing protein | EUR_RS10515 | Not Available | + | 2201162 - 2204227 | 116870.0 |
| ncs2 family permease | EUR_RS10520 | Not Available | + | 2204321 - 2205751 | 50235.8 |
| nucleotidyltransferase/dna polymerase involved in dna repair | EUR_RS10525 | Not Available | + | 2206113 - 2207903 | 67625.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.