Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | EUR_RS09930 | Not Available | + | 2062909 - 2063490 | 21055.3 |
| atp-dependent clp protease atp-binding subunit clpx | EUR_RS09935 | Not Available | + | 2063559 - 2064830 | 46241.3 |
| endopeptidase la | EUR_RS09940 | Not Available | + | 2064927 - 2067239 | 86122.7 |
| dna topoisomerase iii | EUR_RS09945 | Not Available | + | 2067256 - 2067846 | 22086.7 |
| metal abc transporter substrate-binding protein | EUR_RS09950 | Not Available | + | 2068070 - 2069182 | 40825.0 |
| metal abc transporter atp-binding protein | EUR_RS09955 | Not Available | + | 2069196 - 2069963 | 28931.0 |
| metal abc transporter permease | EUR_RS09960 | Not Available | + | 2069960 - 2070772 | 29331.1 |
| hypothetical protein | EUR_RS09965 | Not Available | + | 2070918 - 2071589 | 24151.7 |
| methyl-accepting chemotaxis protein | EUR_RS09970 | Not Available | + | 2071775 - 2073496 | 62253.4 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | EUR_RS09975 | Not Available | + | 2073763 - 2074644 | 32211.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.