Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis DSM 17629
Accession NumberNC_021010.1
Gene Summary
Adenine Count
993254 bp
Thymine Count
916171 bp
Guanine Count
725212 bp
Cytosine Count
624393 bp
Genome Length
3344951 bp
Protein-coding Genes
3075 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna/rna non-specific endonuclease | EUR_RS04235 | Not Available | + | 879665 - 880696 | 36631.7 |
| histidine--trna ligase | EUR_RS04240 | Not Available | + | 880880 - 882139 | 47305.8 |
| aspartate--trna ligase | EUR_RS04245 | Not Available | + | 882228 - 884024 | 67506.9 |
| hypothetical protein | EUR_RS04250 | Not Available | + | 884034 - 885074 | 37603.4 |
| sensor histidine kinase | EUR_RS04255 | Not Available | - | 885410 - 886849 | 53982.8 |
| response regulator transcription factor | EUR_RS04260 | Not Available | - | 886852 - 887553 | 26686.4 |
| endonuclease muts2 | EUR_RS04265 | Not Available | - | 887605 - 889983 | 87638.3 |
| s1c family serine protease | EUR_RS04270 | Not Available | + | 890535 - 891803 | 45019.1 |
| 3'-5' exoribonuclease yham family protein | EUR_RS04275 | Not Available | + | 891822 - 892766 | 35514.5 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EUR_RS04280 | Not Available | + | 892852 - 894333 | 55607.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.