Alistipes indistinctus

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes indistinctus is a Gram-negative, rod-shaped bacterium that thrives in mesophilic temperatures, categorized as a Chemoheterotroph, and can be found in various body sites, including the gut, skin, and respiratory tract, across different species. As an Obligate Anaerobe, Alistipes indistinctus requires the absence of oxygen to grow and survive. The Gram-negative characteristic indicates that the bacterium has a thin peptidoglycan layer in its cell wall, making it more resistant to certain antibiotics. Its rod-shaped morphology allows it to maintain a large surface area, facilitating the absorption of nutrients from its environment. As a mesophilic microorganism, Alistipes indistinctus grows best in moderate temperatures, typically between 20-45°C, which is ideal for its survival in the human body.As a Chemoheterotroph, Alistipes indistinctus relies on chemical compounds for energy and organic compounds for carbon, breaking down complex molecules into simpler ones to sustain its growth. The bacterium's presence in various body sites, including the gut, skin, and respiratory tract, suggests its ability to adapt to different environments and host-microbe interactions. The absence of oxygen is crucial for its growth, as it is unable to survive in aerobic conditions. Alistipes indistinctus plays a significant role in the human microbiome, particularly in the gut, where it contributes to the breakdown of complex carbohydrates and produces short-chain fatty acids, which can influence host health and disease. Research has shown that an imbalance of Alistipes indistinctus in the gut microbiome has been linked to various diseases, including inflammatory bowel disease and obesity, highlighting the importance of this microbe in maintaining a healthy balance in the human body.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes indistinctus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes indistinctus

Accession NumberQRXW00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2369 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+3 - 1541Not Available
23s ribosomal rnaNot AvailableNot Available+16 - 2884Not Available
glucose-1-phosphate thymidylyltransferaseDWW78_00005Not Available-1 - 60221823.3
upxy family transcription antiterminatorDWW78_00010Not Available-863 - 138420330.8
efflux rnd transporter periplasmic adaptor subunitDWW78_00015Not Available+1723 - 302747431.2
5s ribosomal rnaNot AvailableNot Available+2979 - 3090Not Available
multidrug efflux rnd transporter permease subunitDWW78_00020Not Available+3031 - 6192114871.0
tolc family proteinDWW78_00025Not Available+6197 - 757951409.8
glycerol-3-phosphate dehydrogenase/oxidaseDWW78_00030Not Available+7670 - 923258148.0
deor/glpr transcriptional regulatorDWW78_00035Not Available-9456 - 1022327772.9

Displaying genes 1 – 10 of 2416 in total

Pathways

20 pathways

Metabolites

294 records
Metabolite IDMetabolite nameStructureCAS number
BASm0009937Adenosine diphosphate riboseC15H23N5O14P2Chemical structure of Adenosine diphosphate ribose20762-30-5
Average559.3157Da
Monoisotopic559.0716735Da
BASm0010887(4R,5S)-dethiobiotinC10H18N2O3Chemical structure of (4R,5S)-dethiobiotin533-48-2
Average214.2615Da
Monoisotopic214.1317425Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014031Butyric acidC4H8O2Chemical structure of Butyric acid107-92-6
Average88.1051Da
Monoisotopic88.0524295Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014035Glycolic acidC2H4O3Chemical structure of Glycolic acid79-14-1
Average76.0514Da
Monoisotopic76.016043994Da
BASm0014036Glyoxylic acidC2H2O3Chemical structure of Glyoxylic acid298-12-4
Average74.0355Da
Monoisotopic74.00039393Da
BASm0014037Fumaric acidC4H4O4Chemical structure of Fumaric acid110-17-8
Average116.0722Da
Monoisotopic116.010958616Da
BASm0014038Malic acidC4H6O5Chemical structure of Malic acid97-67-6
Average134.0874Da
Monoisotopic134.021523302Da

Displaying 41–50 of 294 metabolites