Caldicellulosiruptor obsidiansis OB47

Gram-positiveBacilliNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Order

Caldicellulosiruptorales

Family

Caldicellulosiruptoraceae

Genus

Caldicellulosiruptor

Description

Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) is an extremely thermophilic anaerobic Gram-positive bacterium isolated from Obsidian Pool, Yellowstone National Park, USA, in enrichment cultures containing dilute acid-pretreated switchgrass as the primary carbon and energy source, for bioprocessing. It is a novel cellulolytic bacterium capable of hydrolyzing plant-derived polymers through the expression of multidomain/multifunctional hydrolases. (Adapted from PMID: 20851897). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumBacillota
Class
OrderCaldicellulosiruptorales
FamilyCaldicellulosiruptoraceae
GenusCaldicellulosiruptor
SpeciesCaldicellulosiruptor obsidiansis
StrainOB47

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Caldicellulosiruptor obsidiansis OB47
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature80
Temperature rangeHyperthermophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Caldicellulosiruptor obsidiansis OB47

Accession NumberNC_014392.1

Gene Summary

Adenine Count

822031 bp

Thymine Count

817831 bp

Guanine Count

448612 bp

Cytosine Count

443869 bp

Genome Length

2532343 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ribulose-phosphate 3-epimeraseCOB47_RS07435Not Available-1592866 - 159353124123.4
ribosome small subunit-dependent gtpase aCOB47_RS07440Not Available-1593548 - 159442032550.8
stk1 family pasta domain-containing ser/thr kinaseCOB47_RS07445Not Available-1594423 - 159630669426.6
stp1/irep family pp2c-type ser/thr phosphataseCOB47_RS07450Not Available-1596341 - 159707828000.5
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnCOB47_RS07455Not Available-1597082 - 159811639355.8
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbCOB47_RS07460Not Available-1598122 - 159941749889.4
zinc metallopeptidaseCOB47_RS07465Not Available-1599420 - 160011525615.9
methionyl-trna formyltransferaseCOB47_RS07470Not Available-1600137 - 160105734435.3
peptide deformylaseCOB47_RS07475Not Available-1601104 - 160160418890.7
primosomal protein n'COB47_RS07480Not Available-1601632 - 160380683329.4

Displaying genes 1531 – 1540 of 2411 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites