Caldicellulosiruptor obsidiansis OB47

Gram-positiveBacilliNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Order

Caldicellulosiruptorales

Family

Caldicellulosiruptoraceae

Genus

Caldicellulosiruptor

Description

Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) is an extremely thermophilic anaerobic Gram-positive bacterium isolated from Obsidian Pool, Yellowstone National Park, USA, in enrichment cultures containing dilute acid-pretreated switchgrass as the primary carbon and energy source, for bioprocessing. It is a novel cellulolytic bacterium capable of hydrolyzing plant-derived polymers through the expression of multidomain/multifunctional hydrolases. (Adapted from PMID: 20851897). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumBacillota
Class
OrderCaldicellulosiruptorales
FamilyCaldicellulosiruptoraceae
GenusCaldicellulosiruptor
SpeciesCaldicellulosiruptor obsidiansis
StrainOB47

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Caldicellulosiruptor obsidiansis OB47
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature80
Temperature rangeHyperthermophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Caldicellulosiruptor obsidiansis OB47

Accession NumberNC_014392.1

Gene Summary

Adenine Count

822031 bp

Thymine Count

817831 bp

Guanine Count

448612 bp

Cytosine Count

443869 bp

Genome Length

2532343 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
trar/dksa c4-type zinc finger proteinCOB47_RS06000Not Available-1312281 - 131289823913.3
duf5665 domain-containing proteinCOB47_RS12595Not Available-1312926 - 13130936174.83
s-methyl-5'-thioadenosine phosphorylaseCOB47_RS06010Not Available+1313303 - 131407629389.3
s-methyl-5-thioribose-1-phosphate isomeraseCOB47_RS06015Not Available+1314084 - 131511238318.3
transposaseCOB47_RS06020Not Available-1315737 - 131601811054.1
hypothetical proteinCOB47_RS06025Not Available+1316127 - 131675324012.4
transposase family proteinCOB47_RS12905Not Available+1316947 - 13171477706.18
transposaseCOB47_RS12910Not Available+1317140 - 13173287510.49
hypothetical proteinCOB47_RS06040Not Available-1317586 - 131821824460.0
amidase domain-containing proteinCOB47_RS06045Not Available-1318378 - 131954145175.6

Displaying genes 1241 – 1250 of 2411 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites