Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Alicycliphilus denitrificans BC
Accession NumberNC_014908.1
Gene Summary
Adenine Count
25582 bp
Thymine Count
24340 bp
Guanine Count
35485 bp
Cytosine Count
34311 bp
Genome Length
119718 bp
Protein-coding Genes
121 genes
Non-Coding Genes
16 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trae/trak family type iv conjugative transfer system protein | ALIDE_RS22055 | Not Available | + | 14557 - 15333 | 28512.0 |
| type-f conjugative transfer system secretin trak | ALIDE_RS22060 | Not Available | + | 15342 - 16475 | 39619.2 |
| trab/virb10 family protein | ALIDE_RS22065 | Not Available | + | 16472 - 17902 | 49577.6 |
| type iv conjugative transfer system lipoprotein trav | ALIDE_RS23690 | Not Available | + | 17908 - 18417 | 18657.9 |
| traa family conjugative transfer protein | ALIDE_RS22075 | Not Available | + | 18453 - 18788 | 11022.8 |
| type iv secretion system protein trac | ALIDE_RS22080 | Not Available | + | 18799 - 21243 | 91496.6 |
| hypothetical protein | ALIDE_RS22085 | Not Available | + | 21251 - 21745 | 17918.3 |
| signal peptidase i | ALIDE_RS22090 | Not Available | + | 21802 - 22407 | 22144.2 |
| trbc family f-type conjugative pilus assembly protein | ALIDE_RS22095 | Not Available | + | 22370 - 23554 | 44438.4 |
| trau family protein | ALIDE_RS22100 | Not Available | + | 23554 - 24708 | 41843.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.