Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Alicycliphilus denitrificans BC
Accession NumberNC_014908.1
Gene Summary
Adenine Count
25582 bp
Thymine Count
24340 bp
Guanine Count
35485 bp
Cytosine Count
34311 bp
Genome Length
119718 bp
Protein-coding Genes
121 genes
Non-Coding Genes
16 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system yafq family toxin | ALIDE_RS22750 | Not Available | - | 44017 - 44298 | 10611.6 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | ALIDE_RS22755 | Not Available | - | 44285 - 44551 | 9654.54 |
| plasmid replication initiator trfa | ALIDE_RS22760 | Not Available | - | 45090 - 46310 | 45768.4 |
| single-stranded dna-binding protein | ALIDE_RS22765 | Not Available | - | 46357 - 46698 | 12655.8 |
| transcriptional regulator | ALIDE_RS22770 | Not Available | + | 46812 - 47174 | 13342.2 |
| p-type conjugative transfer atpase trbb | ALIDE_RS22775 | Not Available | + | 47484 - 48446 | 35074.9 |
| conjugal transfer system pilin trbc | ALIDE_RS22780 | Not Available | + | 48463 - 48927 | 16354.2 |
| conjugal transfer protein trbd | ALIDE_RS22785 | Not Available | + | 48931 - 49242 | 11802.6 |
| virb4 family type iv secretion/conjugal transfer atpase | ALIDE_RS22790 | Not Available | + | 49239 - 51797 | 93985.5 |
| conjugal transfer protein trbf | ALIDE_RS22795 | Not Available | + | 51794 - 52576 | 28704.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.